This question needs to be directed to the local Building Official, AHJ, as this would be a procedural question associated with this re-roof permit.
I am not clear if this question is about a re-roof permit or new construction sheathing inspection, but either way it appears that a Chapter 1 requires a sheathing inspection in Section 110.3, UNLESS Chapter 1 is rewritten to accept an affidavit by the local building department. Chapter 1 is the only Chapter in the code that that be modified by the local building departments.
According to the attachment, this is about re-roofs only. Many of the re-roof jobs in our municipality are completed in one day by 7-8 man crews. It does not seem reasonable to have a roof stripped, then renailed, and then wait for an inspector to show up. It risks the drywall and furniture in the residence. We require pics of each plane of the roof(sheathing nailing and dry-in) and an affidavit. We do a final roof inspection only. To answer the question, yes the code allows a notarized affidavit in lieu of a municipal inspector.